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vmdmagazinedatabase: 21 Hits

<box 100% round #000000> {{:software:vmdmagazine:database.png?direct&300|}} </box> **Contents :** {{INLI... , diamond,etc. ### //**Screenshots**// {{gallery>software::vmdmagazine::allotropy?*&250x250&lightbox}} //**Version:**// (2013/10/03) {{:software:vmdmagazine:download:allotropy.zip| Version 1.1}} //**Langua... feine, cocaine. ### //**Screenshots**// {{gallery>software:vmdmagazine:alkaloids?*&250x250&lightbox}} //**V

software: 11 Hits

~~NOTOC~~ <WRAP column 15%> {{:folder-software.png?direct|}} </WRAP> \\ \\ List of Software currently avail... Database: \\ ---- <WRAP column 15%> [[vslab|{{:software:vslab:vslab3.png?direct&200|}}]] </WRAP> [[vslab... al interface for the well known molecular docking software AutoGrid/AutoDock that has been included into VMD... niques. ### ---- <WRAP column 15%> [[compasm|{{:software:compasm:compasm4.jpg?direct&200|}}]] </WRAP> [[c

vmdmagazine: 9 Hits

le for classes/lectures and even conferences. The software will help students/audience to understand atoms a... rry about the handling of molecular visualization software or in the preparation of such types of visualizat... ### As **//VMDMagazine//** only requires the VMD software it can be used in any platform where VMD can be u... nux Os. ### ===== 2. ScreenShots ===== {{gallery>software:vmdmagazine:screenshots?*&150x150&lightbox}} ==

vslab: 8 Hits

ss of developing new drugs. There is much docking software that has been successfully used in a myriad of ke... , as commonly happens with most of the scientific software, the programs are often complex and a deep knowle... al interface for the well known molecular docking software AutoGrid/AutoDock that has been included into VMD... se techniques. The potential associated to this software makes it an attractive choice not only for educat

madamm: 8 Hits

lecular Modeling protocol. Generally speaking the software uses standard docking software and molecular mech... ilable. ### ===== 2. ScreenShots ===== {{gallery>software:madamm?*&150x150&lightbox}} ===== 3. Download ===... the vsÇab plug-in, the Visual Molecular dynamics software (VMD) must be installed. It can be found at http:... ms, due to the limitations of the GOLD and Charmm software. ### To install MADAMM just download the zip fil

chem-path-tracker: 6 Hits

lation. ### ===== 2. ScreenShots ===== {{gallery>software::biopathfinder?*&150x150&lightbox}} ===== 3. Do... th-Tracker plug-in, the Visual Molecular dynamics software (VMD) must be installed. It can be found at http:... . <note tip> * Chem-Path-Tracker Plug-in : {{:software:biopathfinder:chempathtracker.zip| Version 1.0}} ... .e., Windows, OSX and LINUX. - Install the VMD software ( if you haven't yet installed). - Extract chem

volarea: 5 Hits

a plug-in of the widely spread molecular graphics software Visual Molecular Dynamics (VMD), which allows the... format. ### ===== 2. ScreenShots ===== {{gallery>software::volarea?*&150x150&lightbox}} ===== 3. Download... olArea//** plug-in, the Visual Molecular dynamics software (VMD) must be installed. It can be found at http:... > * VolArea Plug-in : [[http://compbiochem.org/Software/Volarea/Download.html|** version v1.0**]] </no

selector_manager: 5 Hits

e molecular structures. The main drawback of this software is the learning curve that turns it hard to use b... {{::2014-03-10_02.49.15_pm.png?direct&150|}} {{:software:screen_shot_2014-03-10_at_14.51.33.png?direct&150... _shot_2014-03-10_at_14.52.55.png?direct&150|}} {{:software:screen_shot_2014-03-10_at_15.03.23.png?direct&150... r Manager" plug-in, the Visual Molecular dynamics software (VMD) must be installed. It can be found at http:

selection_manager: 4 Hits

e molecular structures. The main drawback of this software is the learning curve that turns it hard to use b... {{::2014-03-10_02.49.15_pm.png?direct&150|}} {{:software:screen_shot_2014-03-10_at_14.51.33.png?direct&150... _shot_2014-03-10_at_14.52.55.png?direct&150|}} {{:software:screen_shot_2014-03-10_at_15.03.23.png?direct&150... n Manager" plug-in, the Visual Molecular dynamics software (VMD) must be installed. It can be found at http:

biopathfinder: 4 Hits

lation. ### ===== 2. ScreenShots ===== {{gallery>software::biopathfinder?*&150x150&lightbox}} ===== 3. Do... PathFinder plug-in, the Visual Molecular dynamics software (VMD) must be installed. It can be found at http:... .e., Windows, OSX and LINUX. - Install the VMD software ( if you haven't yet installed). - Extract biop... n: [[https://dl.dropboxusercontent.com/u/2521100/Software/BiopathFimder/BioPathFinder_Tutorial.pdf|Example

compasm: 4 Hits

re, requiring only very little user effort. This software is composed by two main packages: the Core and Gr... esults. ### ===== 2. ScreenShots ===== {{gallery>software::compasm?*&150x150&lightbox}} ===== 3. Download... ompASM//** plug-in, the Visual Molecular dynamics software (VMD) must be installed. It can be found at http:... .e., Windows, OSX and LINUX. - Install the VMD software ( if you haven't yet installed). - Download the

frontpage: 2 Hits

rce field parameterization, benchmark studies and software development produced by our group members. ### ##... chamism|An interwiki link @ 349,0,474,144]] * [[software|An interwiki link @ 508,0,633,139]] {{<map}}

sidebar: 2 Hits

ameters]]\\ * [[Enzymatic Mechanisms]]\\ **[[software | Software]]** * [[VsLab]]\\ * [[MADAMM]]\\

molup: 1 Hits

005.png?direct&200|}} ===== 3. Download ===== The software was migrated to GitHub. Please, visit https://git

wiki:dokuwiki: 1 Hits